Endogenous florendoviruses are major components of plant genomes and hallmarks of virus evolution
Identifieur interne : 000043 ( France/Analysis ); précédent : 000042; suivant : 000044Endogenous florendoviruses are major components of plant genomes and hallmarks of virus evolution
Auteurs : Andrew D. W. Geering [Australie] ; Florian Maumus [France] ; Dario Copetti [États-Unis] ; Nathalie Choisne [France] ; Derrick J. Zwickl [États-Unis] ; Matthias Zytnicki [France] ; Alistair R. Mctaggart [Australie] ; Simone Scalabrin [Italie] ; Silvia Vezzulli [Italie] ; Rod A. Wing [États-Unis] ; Hadi Quesneville [France] ; Pierre-Yves Teycheney [France]Source :
- Nature Communications [ 2041-1723 ] ; 2014.
Abstract
The extent and importance of endogenous viral elements have been extensively described in animals but are much less well understood in plants. Here we describe a new genus of
Url:
DOI: 10.1038/ncomms6269
PubMed: 25381880
PubMed Central: 4241990
Affiliations:
Links toward previous steps (curation, corpus...)
- to stream Pmc, to step Corpus: 000444
- to stream Pmc, to step Curation: 000443
- to stream Pmc, to step Checkpoint: 000845
- to stream Ncbi, to step Merge: 001898
- to stream Ncbi, to step Curation: 001898
- to stream Ncbi, to step Checkpoint: 001898
- to stream Main, to step Merge: 000B10
- to stream Main, to step Curation: 000B08
- to stream Main, to step Exploration: 000B08
- to stream France, to step Extraction: 000043
Links to Exploration step
PMC:4241990Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Endogenous florendoviruses are major components of plant genomes and hallmarks of virus evolution</title><author><name sortKey="Geering, Andrew D W" sort="Geering, Andrew D W" uniqKey="Geering A" first="Andrew D. W." last="Geering">Andrew D. W. Geering</name><affiliation wicri:level="1"><nlm:aff id="a1"><institution>Queensland Alliance for Agriculture and Food Innovation, The University of Queensland</institution>, GPO Box 267, Brisbane, Queensland 4001,<country>Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Maumus, Florian" sort="Maumus, Florian" uniqKey="Maumus F" first="Florian" last="Maumus">Florian Maumus</name><affiliation wicri:level="1"><nlm:aff id="a2"><institution>INRA, UR1164 URGI, INRA de Versailles-Grignon, Route de Saint-Cyr</institution>, Versailles 78026,<country>France</country></nlm:aff><country xml:lang="fr">France</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Copetti, Dario" sort="Copetti, Dario" uniqKey="Copetti D" first="Dario" last="Copetti">Dario Copetti</name><affiliation wicri:level="1"><nlm:aff id="a3"><institution>Arizona Genomics Institute, School of Plant Sciences, BIO5 Institute, University of Arizona</institution>, Tucson, Arizona 85721,<country>USA</country></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation><nlm:aff id="a4"><institution>International Rice Research Institute, Genetic Resource Center</institution>, Los Baños, Laguna,<country>The Philippines</country></nlm:aff><wicri:noCountry code="nlm country">The Philippines</wicri:noCountry></affiliation></author><author><name sortKey="Choisne, Nathalie" sort="Choisne, Nathalie" uniqKey="Choisne N" first="Nathalie" last="Choisne">Nathalie Choisne</name><affiliation wicri:level="1"><nlm:aff id="a2"><institution>INRA, UR1164 URGI, INRA de Versailles-Grignon, Route de Saint-Cyr</institution>, Versailles 78026,<country>France</country></nlm:aff><country xml:lang="fr">France</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Zwickl, Derrick J" sort="Zwickl, Derrick J" uniqKey="Zwickl D" first="Derrick J." last="Zwickl">Derrick J. Zwickl</name><affiliation wicri:level="1"><nlm:aff id="a5"><institution>Department of Ecology and Evolutionary Biology, University of Arizona</institution>, Tucson, Arizona 85721,<country>USA</country></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Zytnicki, Matthias" sort="Zytnicki, Matthias" uniqKey="Zytnicki M" first="Matthias" last="Zytnicki">Matthias Zytnicki</name><affiliation wicri:level="1"><nlm:aff id="a2"><institution>INRA, UR1164 URGI, INRA de Versailles-Grignon, Route de Saint-Cyr</institution>, Versailles 78026,<country>France</country></nlm:aff><country xml:lang="fr">France</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Mctaggart, Alistair R" sort="Mctaggart, Alistair R" uniqKey="Mctaggart A" first="Alistair R." last="Mctaggart">Alistair R. Mctaggart</name><affiliation wicri:level="1"><nlm:aff id="a1"><institution>Queensland Alliance for Agriculture and Food Innovation, The University of Queensland</institution>, GPO Box 267, Brisbane, Queensland 4001,<country>Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Scalabrin, Simone" sort="Scalabrin, Simone" uniqKey="Scalabrin S" first="Simone" last="Scalabrin">Simone Scalabrin</name><affiliation wicri:level="1"><nlm:aff id="a6"><institution>Istituto di Genomica Applicata, Parco Scientifico e Tecnologico di Udine Luigi Danieli</institution>, Via J Linussio 51, 33100 Udine,<country>Italy</country></nlm:aff><country xml:lang="fr">Italie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Vezzulli, Silvia" sort="Vezzulli, Silvia" uniqKey="Vezzulli S" first="Silvia" last="Vezzulli">Silvia Vezzulli</name><affiliation wicri:level="1"><nlm:aff id="a7"><institution>Research and Innovation Centre, Fondazione Edmund Mach</institution>, Via E. Mach 1, 38010 San Michele all’Adige (TN),<country>Italy</country></nlm:aff><country xml:lang="fr">Italie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Wing, Rod A" sort="Wing, Rod A" uniqKey="Wing R" first="Rod A." last="Wing">Rod A. Wing</name><affiliation wicri:level="1"><nlm:aff id="a3"><institution>Arizona Genomics Institute, School of Plant Sciences, BIO5 Institute, University of Arizona</institution>, Tucson, Arizona 85721,<country>USA</country></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation><nlm:aff id="a4"><institution>International Rice Research Institute, Genetic Resource Center</institution>, Los Baños, Laguna,<country>The Philippines</country></nlm:aff><wicri:noCountry code="nlm country">The Philippines</wicri:noCountry></affiliation></author><author><name sortKey="Quesneville, Hadi" sort="Quesneville, Hadi" uniqKey="Quesneville H" first="Hadi" last="Quesneville">Hadi Quesneville</name><affiliation wicri:level="1"><nlm:aff id="a2"><institution>INRA, UR1164 URGI, INRA de Versailles-Grignon, Route de Saint-Cyr</institution>, Versailles 78026,<country>France</country></nlm:aff><country xml:lang="fr">France</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Teycheney, Pierre Yves" sort="Teycheney, Pierre Yves" uniqKey="Teycheney P" first="Pierre-Yves" last="Teycheney">Pierre-Yves Teycheney</name><affiliation wicri:level="1"><nlm:aff id="a8"><institution>CIRAD UMR AGAP, Station de Neufchâteau, Sainte-Marie</institution>, 97130 Capesterre Belle-Eau, Guadeloupe,<country>France</country></nlm:aff><country xml:lang="fr">France</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">25381880</idno><idno type="pmc">4241990</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4241990</idno><idno type="RBID">PMC:4241990</idno><idno type="doi">10.1038/ncomms6269</idno><date when="2014">2014</date><idno type="wicri:Area/Pmc/Corpus">000444</idno><idno type="wicri:Area/Pmc/Curation">000443</idno><idno type="wicri:Area/Pmc/Checkpoint">000845</idno><idno type="wicri:Area/Ncbi/Merge">001898</idno><idno type="wicri:Area/Ncbi/Curation">001898</idno><idno type="wicri:Area/Ncbi/Checkpoint">001898</idno><idno type="wicri:Area/Main/Merge">000B10</idno><idno type="wicri:Area/Main/Curation">000B08</idno><idno type="wicri:Area/Main/Exploration">000B08</idno><idno type="wicri:Area/France/Extraction">000043</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Endogenous florendoviruses are major components of plant genomes and hallmarks of virus evolution</title><author><name sortKey="Geering, Andrew D W" sort="Geering, Andrew D W" uniqKey="Geering A" first="Andrew D. W." last="Geering">Andrew D. W. Geering</name><affiliation wicri:level="1"><nlm:aff id="a1"><institution>Queensland Alliance for Agriculture and Food Innovation, The University of Queensland</institution>, GPO Box 267, Brisbane, Queensland 4001,<country>Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Maumus, Florian" sort="Maumus, Florian" uniqKey="Maumus F" first="Florian" last="Maumus">Florian Maumus</name><affiliation wicri:level="1"><nlm:aff id="a2"><institution>INRA, UR1164 URGI, INRA de Versailles-Grignon, Route de Saint-Cyr</institution>, Versailles 78026,<country>France</country></nlm:aff><country xml:lang="fr">France</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Copetti, Dario" sort="Copetti, Dario" uniqKey="Copetti D" first="Dario" last="Copetti">Dario Copetti</name><affiliation wicri:level="1"><nlm:aff id="a3"><institution>Arizona Genomics Institute, School of Plant Sciences, BIO5 Institute, University of Arizona</institution>, Tucson, Arizona 85721,<country>USA</country></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation><nlm:aff id="a4"><institution>International Rice Research Institute, Genetic Resource Center</institution>, Los Baños, Laguna,<country>The Philippines</country></nlm:aff><wicri:noCountry code="nlm country">The Philippines</wicri:noCountry></affiliation></author><author><name sortKey="Choisne, Nathalie" sort="Choisne, Nathalie" uniqKey="Choisne N" first="Nathalie" last="Choisne">Nathalie Choisne</name><affiliation wicri:level="1"><nlm:aff id="a2"><institution>INRA, UR1164 URGI, INRA de Versailles-Grignon, Route de Saint-Cyr</institution>, Versailles 78026,<country>France</country></nlm:aff><country xml:lang="fr">France</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Zwickl, Derrick J" sort="Zwickl, Derrick J" uniqKey="Zwickl D" first="Derrick J." last="Zwickl">Derrick J. Zwickl</name><affiliation wicri:level="1"><nlm:aff id="a5"><institution>Department of Ecology and Evolutionary Biology, University of Arizona</institution>, Tucson, Arizona 85721,<country>USA</country></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Zytnicki, Matthias" sort="Zytnicki, Matthias" uniqKey="Zytnicki M" first="Matthias" last="Zytnicki">Matthias Zytnicki</name><affiliation wicri:level="1"><nlm:aff id="a2"><institution>INRA, UR1164 URGI, INRA de Versailles-Grignon, Route de Saint-Cyr</institution>, Versailles 78026,<country>France</country></nlm:aff><country xml:lang="fr">France</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Mctaggart, Alistair R" sort="Mctaggart, Alistair R" uniqKey="Mctaggart A" first="Alistair R." last="Mctaggart">Alistair R. Mctaggart</name><affiliation wicri:level="1"><nlm:aff id="a1"><institution>Queensland Alliance for Agriculture and Food Innovation, The University of Queensland</institution>, GPO Box 267, Brisbane, Queensland 4001,<country>Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Scalabrin, Simone" sort="Scalabrin, Simone" uniqKey="Scalabrin S" first="Simone" last="Scalabrin">Simone Scalabrin</name><affiliation wicri:level="1"><nlm:aff id="a6"><institution>Istituto di Genomica Applicata, Parco Scientifico e Tecnologico di Udine Luigi Danieli</institution>, Via J Linussio 51, 33100 Udine,<country>Italy</country></nlm:aff><country xml:lang="fr">Italie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Vezzulli, Silvia" sort="Vezzulli, Silvia" uniqKey="Vezzulli S" first="Silvia" last="Vezzulli">Silvia Vezzulli</name><affiliation wicri:level="1"><nlm:aff id="a7"><institution>Research and Innovation Centre, Fondazione Edmund Mach</institution>, Via E. Mach 1, 38010 San Michele all’Adige (TN),<country>Italy</country></nlm:aff><country xml:lang="fr">Italie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Wing, Rod A" sort="Wing, Rod A" uniqKey="Wing R" first="Rod A." last="Wing">Rod A. Wing</name><affiliation wicri:level="1"><nlm:aff id="a3"><institution>Arizona Genomics Institute, School of Plant Sciences, BIO5 Institute, University of Arizona</institution>, Tucson, Arizona 85721,<country>USA</country></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation><nlm:aff id="a4"><institution>International Rice Research Institute, Genetic Resource Center</institution>, Los Baños, Laguna,<country>The Philippines</country></nlm:aff><wicri:noCountry code="nlm country">The Philippines</wicri:noCountry></affiliation></author><author><name sortKey="Quesneville, Hadi" sort="Quesneville, Hadi" uniqKey="Quesneville H" first="Hadi" last="Quesneville">Hadi Quesneville</name><affiliation wicri:level="1"><nlm:aff id="a2"><institution>INRA, UR1164 URGI, INRA de Versailles-Grignon, Route de Saint-Cyr</institution>, Versailles 78026,<country>France</country></nlm:aff><country xml:lang="fr">France</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Teycheney, Pierre Yves" sort="Teycheney, Pierre Yves" uniqKey="Teycheney P" first="Pierre-Yves" last="Teycheney">Pierre-Yves Teycheney</name><affiliation wicri:level="1"><nlm:aff id="a8"><institution>CIRAD UMR AGAP, Station de Neufchâteau, Sainte-Marie</institution>, 97130 Capesterre Belle-Eau, Guadeloupe,<country>France</country></nlm:aff><country xml:lang="fr">France</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author></analytic><series><title level="j">Nature Communications</title><idno type="eISSN">2041-1723</idno><imprint><date when="2014">2014</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>The extent and importance of endogenous viral elements have been extensively described in animals but are much less well understood in plants. Here we describe a new genus of <italic>Caulimoviridae</italic> called ‘Florendovirus’, members of which have colonized the genomes of a large diversity of flowering plants, sometimes at very high copy numbers (>0.5% total genome content). The genome invasion of <italic>Oryza</italic> is dated to over 1.8 million years ago (MYA) but phylogeographic evidence points to an even older age of 20–34 MYA for this virus group. Some appear to have had a bipartite genome organization, a unique characteristic among viral retroelements. In <italic>Vitis vinifera</italic>, 9% of the endogenous florendovirus loci are located within introns and therefore may influence host gene expression. The frequent colocation of endogenous florendovirus loci with TA simple sequence repeats, which are associated with chromosome fragility, suggests sequence capture during repair of double-stranded DNA breaks.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Brown, J R" uniqKey="Brown J">J. R. Brown</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Keeling, P" uniqKey="Keeling P">P. Keeling</name></author><author><name sortKey="Palmer, J" uniqKey="Palmer J">J. Palmer</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Feschotte, C" uniqKey="Feschotte C">C. Feschotte</name></author><author><name sortKey="Gilbert, C" uniqKey="Gilbert C">C. Gilbert</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Chiba, S" uniqKey="Chiba S">S. Chiba</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Teycheney, P Y" uniqKey="Teycheney P">P.-Y. Teycheney</name></author><author><name sortKey="Geering, A D W" uniqKey="Geering A">A. D. W. Geering</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Liu, H" uniqKey="Liu H">H. Liu</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Cohen, C J" uniqKey="Cohen C">C. J. Cohen</name></author><author><name sortKey="Lock, W M" uniqKey="Lock W">W. M. Lock</name></author><author><name sortKey="Mager, D L" uniqKey="Mager D">D. L. Mager</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Faulkner, G J" uniqKey="Faulkner G">G. J. Faulkner</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Li, J F" uniqKey="Li J">J. F. Li</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Isbel, L" uniqKey="Isbel L">L. Isbel</name></author><author><name sortKey="Whitelaw, E" uniqKey="Whitelaw E">E. Whitelaw</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Macfarlan, T S" uniqKey="Macfarlan T">T. S. Macfarlan</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Dupressoir, A" uniqKey="Dupressoir A">A. Dupressoir</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Aswad, A" uniqKey="Aswad A">A. Aswad</name></author><author><name sortKey="Katzourakis, A" uniqKey="Katzourakis A">A. Katzourakis</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Gayral, P" uniqKey="Gayral P">P. Gayral</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Gifford, R J" uniqKey="Gifford R">R. J. Gifford</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="King, A M Q" uniqKey="King A">A. M. Q. King</name></author><author><name sortKey="Adams, M J" uniqKey="Adams M">M. J. Adams</name></author><author><name sortKey="Carstens, E B" uniqKey="Carstens E">E. B. Carstens</name></author><author><name sortKey="Lefkowitz, E J" uniqKey="Lefkowitz E">E. J. Lefkowitz</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Bertsch, C" uniqKey="Bertsch C">C. Bertsch</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Hansen, C N" uniqKey="Hansen C">C. N. Hansen</name></author><author><name sortKey="Harper, G" uniqKey="Harper G">G. Harper</name></author><author><name sortKey="Heslop Harrison, J S" uniqKey="Heslop Harrison J">J. S. Heslop-Harrison</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Mette, M F" uniqKey="Mette M">M. F. Mette</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Koonin, E V" uniqKey="Koonin E">E. V. Koonin</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Doyle, J A" uniqKey="Doyle J">J. A. Doyle</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Roy, A" uniqKey="Roy A">A. Roy</name></author><author><name sortKey="Shao, J" uniqKey="Shao J">J. Shao</name></author><author><name sortKey="Schneider, W L" uniqKey="Schneider W">W. L. Schneider</name></author><author><name sortKey="Hartung, J S" uniqKey="Hartung J">J. S. Hartung</name></author><author><name sortKey="Brlansky, R H" uniqKey="Brlansky R">R. H. Brlansky</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Geering, A D W" uniqKey="Geering A">A. D. W. Geering</name></author><author><name sortKey="Scharaschkin, T" uniqKey="Scharaschkin T">T. Scharaschkin</name></author><author><name sortKey="Teycheney, P Y" uniqKey="Teycheney P">P.-Y. Teycheney</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kunii, M" uniqKey="Kunii M">M. Kunii</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Carrier, G" uniqKey="Carrier G">G. Carrier</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Mullins, M G" uniqKey="Mullins M">M. G. Mullins</name></author><author><name sortKey="Bouquet, A" uniqKey="Bouquet A">A. Bouquet</name></author><author><name sortKey="Williams, L E" uniqKey="Williams L">L. E. Williams</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Mette, M F" uniqKey="Mette M">M. F. Mette</name></author><author><name sortKey="Aufsatz, W" uniqKey="Aufsatz W">W. Aufsatz</name></author><author><name sortKey="Van Der Winden, J" uniqKey="Van Der Winden J">J. van der Winden</name></author><author><name sortKey="Matzke, M A" uniqKey="Matzke M">M. A. Matzke</name></author><author><name sortKey="Matzke, A J M" uniqKey="Matzke A">A. J. M. Matzke</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Blomberg, J" uniqKey="Blomberg J">J. Blomberg</name></author><author><name sortKey="Benachenhou, F" uniqKey="Benachenhou F">F. Benachenhou</name></author><author><name sortKey="Blikstad, V" uniqKey="Blikstad V">V. Blikstad</name></author><author><name sortKey="Sperber, G" uniqKey="Sperber G">G. Sperber</name></author><author><name sortKey="Mayer, J" uniqKey="Mayer J">J. Mayer</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Li, R Q" uniqKey="Li R">R. Q. Li</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Laco, G S" uniqKey="Laco G">G. S. Laco</name></author><author><name sortKey="Beachy, R N" uniqKey="Beachy R">R. N. Beachy</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Futterer, J" uniqKey="Futterer J">J. Fütterer</name></author><author><name sortKey="Rothnie, H M" uniqKey="Rothnie H">H. M. Rothnie</name></author><author><name sortKey="Hohn, T" uniqKey="Hohn T">T. Hohn</name></author><author><name sortKey="Potrykus, I" uniqKey="Potrykus I">I. Potrykus</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kreuze, J F" uniqKey="Kreuze J">J. F. Kreuze</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Paillart, J C" uniqKey="Paillart J">J.-C. Paillart</name></author><author><name sortKey="Shehu Xhilaga, M" uniqKey="Shehu Xhilaga M">M. Shehu-Xhilaga</name></author><author><name sortKey="Marquet, R" uniqKey="Marquet R">R. Marquet</name></author><author><name sortKey="Mak, J" uniqKey="Mak J">J. Mak</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Viaplana, R" uniqKey="Viaplana R">R. Viaplana</name></author><author><name sortKey="Turner, D S" uniqKey="Turner D">D. S. Turner</name></author><author><name sortKey="Covey, S N" uniqKey="Covey S">S. N. Covey</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Hollister, J D" uniqKey="Hollister J">J. D. Hollister</name></author><author><name sortKey="Gaut, B S" uniqKey="Gaut B">B. S. Gaut</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Zlotorynski, E" uniqKey="Zlotorynski E">E. Zlotorynski</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Dillon, L W" uniqKey="Dillon L">L. W. Dillon</name></author><author><name sortKey="Pierce, L C T" uniqKey="Pierce L">L. C. T. Pierce</name></author><author><name sortKey="Ng, M C Y" uniqKey="Ng M">M. C. Y. Ng</name></author><author><name sortKey="Wang, Y H" uniqKey="Wang Y">Y.-H. Wang</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Huertas, P" uniqKey="Huertas P">P. Huertas</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Lim, K Y" uniqKey="Lim K">K. Y. Lim</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Ma, J" uniqKey="Ma J">J. Ma</name></author><author><name sortKey="Devos, K M" uniqKey="Devos K">K. M. Devos</name></author><author><name sortKey="Bennetzen, J L" uniqKey="Bennetzen J">J. L. Bennetzen</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Gandolfo, M A" uniqKey="Gandolfo M">M. A. Gandolfo</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Coxall, H K" uniqKey="Coxall H">H. K. Coxall</name></author><author><name sortKey="Wilson, P A" uniqKey="Wilson P">P. A. Wilson</name></author><author><name sortKey="Palike, H" uniqKey="Palike H">H. Palike</name></author><author><name sortKey="Lear, C H" uniqKey="Lear C">C. H. Lear</name></author><author><name sortKey="Backman, J" uniqKey="Backman J">J. Backman</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Livermore, R" uniqKey="Livermore R">R. Livermore</name></author><author><name sortKey="Nankivell, A" uniqKey="Nankivell A">A. Nankivell</name></author><author><name sortKey="Eagles, G" uniqKey="Eagles G">G. Eagles</name></author><author><name sortKey="Morris, P" uniqKey="Morris P">P. Morris</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Olmstead, R G" uniqKey="Olmstead R">R. G. Olmstead</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Ladiges, P Y" uniqKey="Ladiges P">P. Y. Ladiges</name></author><author><name sortKey="Marks, C E" uniqKey="Marks C">C. E. Marks</name></author><author><name sortKey="Nelson, G" uniqKey="Nelson G">G. Nelson</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Richert Poggeler, K R" uniqKey="Richert Poggeler K">K. R. Richert-Pöggeler</name></author><author><name sortKey="Noreen, F" uniqKey="Noreen F">F. Noreen</name></author><author><name sortKey="Schwarzacher, T" uniqKey="Schwarzacher T">T. Schwarzacher</name></author><author><name sortKey="Harper, G" uniqKey="Harper G">G. Harper</name></author><author><name sortKey="Hohn, T" uniqKey="Hohn T">T. Hohn</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Mollov, D" uniqKey="Mollov D">D. Mollov</name></author><author><name sortKey="Lockhart, B" uniqKey="Lockhart B">B. Lockhart</name></author><author><name sortKey="Zlesak, D C" uniqKey="Zlesak D">D. C. Zlesak</name></author><author><name sortKey="Olszewski, N" uniqKey="Olszewski N">N. Olszewski</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Jakowitsch, J" uniqKey="Jakowitsch J">J. Jakowitsch</name></author><author><name sortKey="Mette, M F" uniqKey="Mette M">M. F. Mette</name></author><author><name sortKey="Van Der Winden, J" uniqKey="Van Der Winden J">J. van der Winden</name></author><author><name sortKey="Matzke, M A" uniqKey="Matzke M">M. A. Matzke</name></author><author><name sortKey="Matzke, A J M" uniqKey="Matzke A">A. J. M. Matzke</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Wesley, S V" uniqKey="Wesley S">S. V. Wesley</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kejnovsky, E" uniqKey="Kejnovsky E">E. Kejnovsky</name></author><author><name sortKey="Leitch, I J" uniqKey="Leitch I">I. J. Leitch</name></author><author><name sortKey="Leitch, A R" uniqKey="Leitch A">A. R. Leitch</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Zdobnov, E M" uniqKey="Zdobnov E">E. M. Zdobnov</name></author><author><name sortKey="Apweiler, R" uniqKey="Apweiler R">R. Apweiler</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Marchler Bauer, A" uniqKey="Marchler Bauer A">A. Marchler-Bauer</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Tamura, K" uniqKey="Tamura K">K. Tamura</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Talavera, G" uniqKey="Talavera G">G. Talavera</name></author><author><name sortKey="Castresana, J" uniqKey="Castresana J">J. Castresana</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Ronquist, F" uniqKey="Ronquist F">F. Ronquist</name></author><author><name sortKey="Huelsenbeck, J P" uniqKey="Huelsenbeck J">J. P. Huelsenbeck</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Stamatakis, A" uniqKey="Stamatakis A">A. Stamatakis</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Nylander, J A A" uniqKey="Nylander J">J. A. A. Nylander</name></author><author><name sortKey="Wilgenbusch, J C" uniqKey="Wilgenbusch J">J. C. Wilgenbusch</name></author><author><name sortKey="Warren, D L" uniqKey="Warren D">D. L. Warren</name></author><author><name sortKey="Swofford, D L" uniqKey="Swofford D">D. L. Swofford</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Price, A L" uniqKey="Price A">A. L. Price</name></author><author><name sortKey="Jones, N C" uniqKey="Jones N">N. C. Jones</name></author><author><name sortKey="Pevzner, P A" uniqKey="Pevzner P">P. A. Pevzner</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Flutre, T" uniqKey="Flutre T">T. Flutre</name></author><author><name sortKey="Duprat, E" uniqKey="Duprat E">E. Duprat</name></author><author><name sortKey="Feuillet, C" uniqKey="Feuillet C">C. Feuillet</name></author><author><name sortKey="Quesneville, H" uniqKey="Quesneville H">H. Quesneville</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Benson, G" uniqKey="Benson G">G. Benson</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Zwickl, D J" uniqKey="Zwickl D">D. J. Zwickl</name></author><author><name sortKey="Stein, J C" uniqKey="Stein J">J. C. Stein</name></author><author><name sortKey="Wing, R A" uniqKey="Wing R">R. A. Wing</name></author><author><name sortKey="Ware, D" uniqKey="Ware D">D. Ware</name></author><author><name sortKey="Sanderson, M J" uniqKey="Sanderson M">M. J. Sanderson</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Loytynoja, A" uniqKey="Loytynoja A">A. Löytynoja</name></author><author><name sortKey="Goldman, N" uniqKey="Goldman N">N. Goldman</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Zwickl, D J" uniqKey="Zwickl D">D. J. Zwickl</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Britton, T" uniqKey="Britton T">T. Britton</name></author><author><name sortKey="Anderson, C L" uniqKey="Anderson C">C. L. Anderson</name></author><author><name sortKey="Jacquet, D" uniqKey="Jacquet D">D. Jacquet</name></author><author><name sortKey="Lundqvist, S" uniqKey="Lundqvist S">S. Lundqvist</name></author><author><name sortKey="Bremer, K" uniqKey="Bremer K">K. Bremer</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Tang, L" uniqKey="Tang L">L. Tang</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Zou, X H" uniqKey="Zou X">X. H. Zou</name></author><author><name sortKey="Yang, Z" uniqKey="Yang Z">Z. Yang</name></author><author><name sortKey="Doyle, J J" uniqKey="Doyle J">J. J. Doyle</name></author><author><name sortKey="Ge, S" uniqKey="Ge S">S. Ge</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Jacquemin, J" uniqKey="Jacquemin J">J. Jacquemin</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Grabherr, M G" uniqKey="Grabherr M">M. G. Grabherr</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Langmead, B" uniqKey="Langmead B">B. Langmead</name></author><author><name sortKey="Salzberg, S L" uniqKey="Salzberg S">S. L. Salzberg</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Zytnicki, M" uniqKey="Zytnicki M">M. Zytnicki</name></author><author><name sortKey="Quesneville, H" uniqKey="Quesneville H">H. Quesneville</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list><country><li>Australie</li><li>France</li><li>Italie</li><li>États-Unis</li></country></list><tree><country name="Australie"><noRegion><name sortKey="Geering, Andrew D W" sort="Geering, Andrew D W" uniqKey="Geering A" first="Andrew D. W." last="Geering">Andrew D. W. Geering</name></noRegion><name sortKey="Mctaggart, Alistair R" sort="Mctaggart, Alistair R" uniqKey="Mctaggart A" first="Alistair R." last="Mctaggart">Alistair R. Mctaggart</name></country><country name="France"><noRegion><name sortKey="Maumus, Florian" sort="Maumus, Florian" uniqKey="Maumus F" first="Florian" last="Maumus">Florian Maumus</name></noRegion><name sortKey="Choisne, Nathalie" sort="Choisne, Nathalie" uniqKey="Choisne N" first="Nathalie" last="Choisne">Nathalie Choisne</name><name sortKey="Quesneville, Hadi" sort="Quesneville, Hadi" uniqKey="Quesneville H" first="Hadi" last="Quesneville">Hadi Quesneville</name><name sortKey="Teycheney, Pierre Yves" sort="Teycheney, Pierre Yves" uniqKey="Teycheney P" first="Pierre-Yves" last="Teycheney">Pierre-Yves Teycheney</name><name sortKey="Zytnicki, Matthias" sort="Zytnicki, Matthias" uniqKey="Zytnicki M" first="Matthias" last="Zytnicki">Matthias Zytnicki</name></country><country name="États-Unis"><noRegion><name sortKey="Copetti, Dario" sort="Copetti, Dario" uniqKey="Copetti D" first="Dario" last="Copetti">Dario Copetti</name></noRegion><name sortKey="Wing, Rod A" sort="Wing, Rod A" uniqKey="Wing R" first="Rod A." last="Wing">Rod A. Wing</name><name sortKey="Zwickl, Derrick J" sort="Zwickl, Derrick J" uniqKey="Zwickl D" first="Derrick J." last="Zwickl">Derrick J. Zwickl</name></country><country name="Italie"><noRegion><name sortKey="Scalabrin, Simone" sort="Scalabrin, Simone" uniqKey="Scalabrin S" first="Simone" last="Scalabrin">Simone Scalabrin</name></noRegion><name sortKey="Vezzulli, Silvia" sort="Vezzulli, Silvia" uniqKey="Vezzulli S" first="Silvia" last="Vezzulli">Silvia Vezzulli</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Wicri/Bois/explor/OrangerV1/Data/France/Analysis
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000043 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/France/Analysis/biblio.hfd -nk 000043 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien
|wiki= Wicri/Bois
|area= OrangerV1
|flux= France
|étape= Analysis
|type= RBID
|clé= PMC:4241990
|texte= Endogenous florendoviruses are major components of plant genomes and hallmarks of virus evolution
}}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/France/Analysis/RBID.i -Sk "pubmed:25381880" \
| HfdSelect -Kh $EXPLOR_AREA/Data/France/Analysis/biblio.hfd \
| NlmPubMed2Wicri -a OrangerV1
| This area was generated with Dilib version V0.6.25. |  |